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CN09_34130 protein (Agrobacterium rhizogenes) - STRING interaction network
"CN09_34130" - DNA mismatch repair protein MutT in Agrobacterium rhizogenes
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Databases
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[Homology]
Score
CN09_34130DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method- Protein Homology (319 aa)    
Predicted Functional Partners:
CN09_34135
Diadenosine tetraphosphate hydrolase; Derived by automated computational analysis using gene prediction method- Protein Homology (136 aa)
 
     
  0.962
dnaX
DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity (625 aa)
   
        0.860
CN09_34125
DNA-binding protein; Derived by automated computational analysis using gene prediction method- Protein Homology (228 aa)
              0.839
CN09_34145
Nucleoid-associated protein CN09_34145; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection (107 aa)
              0.819
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (201 aa)
   
   
  0.753
CN09_17050
Adenine glycosylase; Derived by automated computational analysis using gene prediction method- Protein Homology (362 aa)
   
        0.752
CN09_16305
Modulator protein; Derived by automated computational analysis using gene prediction method- Protein Homology (449 aa)
   
        0.748
CN09_16310
Inositol-1-monophosphatase; Derived by automated computational analysis using gene prediction method- Protein Homology; Belongs to the inositol monophosphatase superfamily (269 aa)
              0.744
CN09_17060
DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method- Protein Homology (245 aa)
   
        0.723
CN09_04750
Methionine synthase; Derived by automated computational analysis using gene prediction method- Protein Homology (1258 aa)
              0.722
Your Current Organism:
Agrobacterium rhizogenes
NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509
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