CN09_34520 protein (Agrobacterium rhizogenes)

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second shell of interactors

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

CN09_34520

Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+ (136 aa)

Predicted Functional Partners:

CN09_34510

0.608

CN09_34515

0.608

CN09_34505

0.552

CN09_34525

0.523

Your Current Organism:

Agrobacterium rhizogenes

NCBI taxonomy Id: 359
Other names: A. rhizogenes, ATCC 11325, Agrobacterium biovar 2, Agrobacterium genomic group 10, Agrobacterium genomic species 10, Agrobacterium genomosp. 10, Agrobacterium rhizogenes, Agrobacterium rhizogenes (RI plasmid PRI1724), Agrobacterium rhizogenes (RI plasmid PRI8196), Agrobacterium rhizogenes (RI plasmid PRIA4B), CFBP 5520, CIP 104328, DSM 30148, ICMP 5794, IFO 13257, JCM 20919, LMG 150, NBRC 13257, NCPPB 2991, Rhizobium rhizogenes, Rhizobium sp. LMG 9509

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node1	node2	node1 annotation	node2 annotation	score
CN09_34505	CN09_34510	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.761
CN09_34505	CN09_34515	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.761
CN09_34505	CN09_34520	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.552
CN09_34510	CN09_34505	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.761
CN09_34510	CN09_34515	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.873
CN09_34510	CN09_34520	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.608
CN09_34515	CN09_34505	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.761
CN09_34515	CN09_34510	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.873
CN09_34515	CN09_34520	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.608
CN09_34515	CN09_34525	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.416
CN09_34520	CN09_34505	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.552
CN09_34520	CN09_34510	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.608
CN09_34520	CN09_34515	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.608
CN09_34520	CN09_34525	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	0.523
CN09_34525	CN09_34515	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.416
CN09_34525	CN09_34520	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology	Uncharacterized protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+	0.523