STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
soxDSarcosine oxidase, delta subunit, heterotetrameric. (101 aa)    
Predicted Functional Partners:
soxG
Glycine cleavage T protein (aminomethyl transferase).
 
 0.998
BAB1_0230
Pyridine nucleotide-disulphide oxidoreductase, class-II:FAD dependent oxidoreductase:Sarcosine oxidase, beta subunit, heterot.
 0.995
BAB2_0543
Conserved hypothetical protein 01244.
  
 0.977
gcvT
Glycine cleavage T protein (aminomethyl transferase).
 
 0.976
BAB1_1481
Conserved hypothetical protein.
 
    0.925
gltB
Glutamate synthase amidotransferase domain:Glutamate synthase central domain.
    
  0.776
BAB1_1482
Phthalate dioxygenase reductase:Ferredoxin:Phenol hydroxylase reductase:Oxidoreductase FAD/NAD(P)-binding:Flavoprotein pyridi.
 
  
 0.759
BAB1_0229
Conserved hypothetical protein.
       0.718
BAB1_1338
Helix-turn-helix, AraC type:Family of unknown function ThiJ/PfpI.
 
    0.716
BAB1_0337
Helix-turn-helix, AraC type:Family of unknown function ThiJ/PfpI.
 
    0.713
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.