STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
omp2aATP/GTP-binding site motif A (P-loop):Porin, alpha proteobacteria type; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (321 aa)    
Predicted Functional Partners:
tolB
TolB, N-terminal; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
 
 0.799
BAB1_1693
Basic-leucine zipper (bZIP) transcription factor.
  
     0.774
BAB1_0782
Conserved hypothetical protein.
  
     0.772
BAB1_0722
OmpA-like transmembrane domain.
  
   0.766
BAB1_1738
Conserved hypothetical protein.
  
     0.766
BAB1_0161
Conserved hypothetical protein.
  
     0.765
BAB1_1029
Conserved hypothetical protein.
  
     0.765
BAB1_1043
Unnamed protein product.
  
     0.754
BAB1_1092
Conserved hypothetical protein.
  
     0.751
BAB1_1302
Membrane protein, putative.
  
   0.743
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.