STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB1_0689Conserved hypothetical protein. (254 aa)    
Predicted Functional Partners:
BAB1_1548
Lipoprotein, putative.
  
     0.771
BAB1_1427
Alpha-isopropylmalate/homocitrate synthase:AsmA.
  
     0.768
BAB1_1029
Conserved hypothetical protein.
  
     0.747
BAB1_0511
Lipoprotein, putative.
  
     0.731
BAB1_1092
Conserved hypothetical protein.
  
     0.721
BAB1_1738
Conserved hypothetical protein.
  
     0.684
BAB1_0690
Conserved hypothetical protein.
       0.668
BAB1_1904
GCN5-related N-acetyltransferase.
  
     0.668
tolA
Proline-rich region:Proline-rich extensin:Histamine H3 receptor.
  
     0.643
BAB2_0665
Conserved hypothetical protein.
  
     0.643
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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