STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB2_0082ATP/GTP-binding site motif A (P-loop). (637 aa)    
Predicted Functional Partners:
BAB1_0785
Putative peptidoglycan binding domain 1:Twin-arginine translocation pathway signal.
 
     0.776
mepA
Peptidase family U6, penicillin-insensitive murein endopeptidase.
  
     0.734
BAB1_1693
Basic-leucine zipper (bZIP) transcription factor.
  
     0.628
BAB1_0161
Conserved hypothetical protein.
  
     0.548
BAB1_1053
Conserved hypothetical protein 1620.
  
     0.540
BAB1_2034
Pollen allergen Poa pIX/Phl pVI, C-terminal.
  
    0.537
BAB1_1296
Peptidase_M15_3 domain-containing protein; Unnamed protein product.
  
     0.536
BAB1_1054
ATP/GTP-binding site motif A (P-loop):YcjX-like protein.
  
     0.530
BAB1_1092
Conserved hypothetical protein.
  
     0.523
BAB1_0589
ErfK/YbiS/YcfS/YnhG:Twin-arginine translocation pathway signal.
 
     0.521
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.