STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAB2_0161Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family. (294 aa)    
Predicted Functional Partners:
BAB2_0849
Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
     0.644
BAB1_1953
Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
     0.600
BAB1_1110
Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
     0.589
BAB2_0162
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
 
     0.584
BAB1_1909
Permease for cytosine/purines, uracil, thiamine, allantoin.
  
     0.531
BAB2_0599
Bacterial regulatory protein LysR, HTH motif:LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
     0.528
gltB
Glutamate synthase amidotransferase domain:Glutamate synthase central domain.
     
 0.499
BAB2_0163
Conserved hypothetical protein.
 
     0.492
BAB2_0329
Bacterial regulatory protein LysR, HTH motif:Immunoglobulin/major histocompatibility complex:LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
     0.481
BAB2_0164
Citrate lyase, beta subunit, putative; Belongs to the HpcH/HpaI aldolase family.
 
     0.472
Your Current Organism:
Brucella abortus
NCBI taxonomy Id: 359391
Other names: B. abortus 2308, Brucella abortus 2308, Brucella melitensis biovar Abortus 2308
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