node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABM45241.1 | efp | BARBAKC583_0159 | BARBAKC583_0158 | Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.806 |
ABM45241.1 | hfq | BARBAKC583_0159 | BARBAKC583_0624 | Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily. | RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.494 |
ABM45241.1 | nusA | BARBAKC583_0159 | BARBAKC583_1252 | Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily. | Transcription elongation protein nusA; Participates in both transcription termination and antitermination. | 0.775 |
ABM45241.1 | nusB | BARBAKC583_0159 | BARBAKC583_0634 | Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily. | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.661 |
ABM45241.1 | nusG | BARBAKC583_0159 | BARBAKC583_0566 | Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily. | Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination. | 0.790 |
ABM45241.1 | rpoA | BARBAKC583_0159 | BARBAKC583_0722 | Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.555 |
ABM45241.1 | rpoB | BARBAKC583_0159 | BARBAKC583_0571 | Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.759 |
ABM45241.1 | rpoC | BARBAKC583_0159 | BARBAKC583_0572 | Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.735 |
ABM45241.1 | rpoZ | BARBAKC583_0159 | BARBAKC583_0467 | Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.793 |
ABM45241.1 | rpsD | BARBAKC583_0159 | BARBAKC583_0826 | Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.558 |
efp | ABM45241.1 | BARBAKC583_0158 | BARBAKC583_0159 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily. | 0.806 |
efp | nusA | BARBAKC583_0158 | BARBAKC583_1252 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Transcription elongation protein nusA; Participates in both transcription termination and antitermination. | 0.763 |
efp | nusG | BARBAKC583_0158 | BARBAKC583_0566 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination. | 0.597 |
efp | rpoA | BARBAKC583_0158 | BARBAKC583_0722 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.671 |
efp | rpoB | BARBAKC583_0158 | BARBAKC583_0571 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.590 |
efp | rpoC | BARBAKC583_0158 | BARBAKC583_0572 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.990 |
efp | rpoZ | BARBAKC583_0158 | BARBAKC583_0467 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.491 |
efp | rpsD | BARBAKC583_0158 | BARBAKC583_0826 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.988 |
hfq | ABM45241.1 | BARBAKC583_0624 | BARBAKC583_0159 | RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily. | 0.494 |
hfq | rpoC | BARBAKC583_0624 | BARBAKC583_0572 | RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.497 |