node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplB2 | rplD2 | BARBAKC583_0701 | BARBAKC583_0699 | Ribosomal protein L2; Identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171. | Ribosomal protein L4; Identified by match to protein family HMM PF00573. | 0.982 |
rplB2 | rpoC | BARBAKC583_0701 | BARBAKC583_0572 | Ribosomal protein L2; Identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
rplB2 | rpsC2 | BARBAKC583_0701 | BARBAKC583_0704 | Ribosomal protein L2; Identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171. | Ribosomal protein S3; Identified by match to protein family HMM PF00189; match to protein family HMM PF00417; match to protein family HMM PF07650; match to protein family HMM TIGR01009. | 0.980 |
rplB2 | rpsE | BARBAKC583_0701 | BARBAKC583_0715 | Ribosomal protein L2; Identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.968 |
rplB2 | rpsH | BARBAKC583_0701 | BARBAKC583_0712 | Ribosomal protein L2; Identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.972 |
rplB2 | rpsJ2 | BARBAKC583_0701 | BARBAKC583_0697 | Ribosomal protein L2; Identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171. | Ribosomal protein S10; Identified by match to protein family HMM PF00338; match to protein family HMM TIGR01049. | 0.969 |
rplB2 | rpsM | BARBAKC583_0701 | BARBAKC583_0720 | Ribosomal protein L2; Identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171. | Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.960 |
rplB2 | rpsN | BARBAKC583_0701 | BARBAKC583_0711 | Ribosomal protein L2; Identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171. | Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.968 |
rplB2 | rpsQ2 | BARBAKC583_0701 | BARBAKC583_0707 | Ribosomal protein L2; Identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171. | Ribosomal protein S17; Identified by match to protein family HMM PF00366. | 0.964 |
rplB2 | rpsS2 | BARBAKC583_0701 | BARBAKC583_0702 | Ribosomal protein L2; Identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171. | Ribosomal protein S19; Identified by match to protein family HMM PF00203; match to protein family HMM TIGR01050. | 0.987 |
rplD2 | rplB2 | BARBAKC583_0699 | BARBAKC583_0701 | Ribosomal protein L4; Identified by match to protein family HMM PF00573. | Ribosomal protein L2; Identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171. | 0.982 |
rplD2 | rpoC | BARBAKC583_0699 | BARBAKC583_0572 | Ribosomal protein L4; Identified by match to protein family HMM PF00573. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
rplD2 | rpsC2 | BARBAKC583_0699 | BARBAKC583_0704 | Ribosomal protein L4; Identified by match to protein family HMM PF00573. | Ribosomal protein S3; Identified by match to protein family HMM PF00189; match to protein family HMM PF00417; match to protein family HMM PF07650; match to protein family HMM TIGR01009. | 0.989 |
rplD2 | rpsE | BARBAKC583_0699 | BARBAKC583_0715 | Ribosomal protein L4; Identified by match to protein family HMM PF00573. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.986 |
rplD2 | rpsH | BARBAKC583_0699 | BARBAKC583_0712 | Ribosomal protein L4; Identified by match to protein family HMM PF00573. | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. | 0.988 |
rplD2 | rpsJ2 | BARBAKC583_0699 | BARBAKC583_0697 | Ribosomal protein L4; Identified by match to protein family HMM PF00573. | Ribosomal protein S10; Identified by match to protein family HMM PF00338; match to protein family HMM TIGR01049. | 0.988 |
rplD2 | rpsM | BARBAKC583_0699 | BARBAKC583_0720 | Ribosomal protein L4; Identified by match to protein family HMM PF00573. | Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.985 |
rplD2 | rpsN | BARBAKC583_0699 | BARBAKC583_0711 | Ribosomal protein L4; Identified by match to protein family HMM PF00573. | Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.988 |
rplD2 | rpsQ2 | BARBAKC583_0699 | BARBAKC583_0707 | Ribosomal protein L4; Identified by match to protein family HMM PF00573. | Ribosomal protein S17; Identified by match to protein family HMM PF00366. | 0.984 |
rplD2 | rpsS2 | BARBAKC583_0699 | BARBAKC583_0702 | Ribosomal protein L4; Identified by match to protein family HMM PF00573. | Ribosomal protein S19; Identified by match to protein family HMM PF00203; match to protein family HMM TIGR01050. | 0.989 |