node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABM45029.1 | miaB | BARBAKC583_1337 | BARBAKC583_1243 | Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.407 |
ABM45029.1 | rlmN | BARBAKC583_1337 | BARBAKC583_1362 | Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.654 |
ABM45079.1 | ABM45248.1 | BARBAKC583_1244 | BARBAKC583_1241 | Identified by match to protein family HMM PF02562. | Identified by match to protein family HMM PF00814. | 0.461 |
ABM45079.1 | ABM45260.1 | BARBAKC583_1244 | BARBAKC583_1242 | Identified by match to protein family HMM PF02562. | Ribosomal-protein-alanine acetyltransferase; Identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575. | 0.471 |
ABM45079.1 | miaB | BARBAKC583_1244 | BARBAKC583_1243 | Identified by match to protein family HMM PF02562. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.514 |
ABM45079.1 | ybeY | BARBAKC583_1244 | BARBAKC583_1245 | Identified by match to protein family HMM PF02562. | Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.986 |
ABM45248.1 | ABM45079.1 | BARBAKC583_1241 | BARBAKC583_1244 | Identified by match to protein family HMM PF00814. | Identified by match to protein family HMM PF02562. | 0.461 |
ABM45248.1 | ABM45260.1 | BARBAKC583_1241 | BARBAKC583_1242 | Identified by match to protein family HMM PF00814. | Ribosomal-protein-alanine acetyltransferase; Identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575. | 0.896 |
ABM45248.1 | miaB | BARBAKC583_1241 | BARBAKC583_1243 | Identified by match to protein family HMM PF00814. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.708 |
ABM45248.1 | ybeY | BARBAKC583_1241 | BARBAKC583_1245 | Identified by match to protein family HMM PF00814. | Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.511 |
ABM45260.1 | ABM45079.1 | BARBAKC583_1242 | BARBAKC583_1244 | Ribosomal-protein-alanine acetyltransferase; Identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575. | Identified by match to protein family HMM PF02562. | 0.471 |
ABM45260.1 | ABM45248.1 | BARBAKC583_1242 | BARBAKC583_1241 | Ribosomal-protein-alanine acetyltransferase; Identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575. | Identified by match to protein family HMM PF00814. | 0.896 |
ABM45260.1 | miaB | BARBAKC583_1242 | BARBAKC583_1243 | Ribosomal-protein-alanine acetyltransferase; Identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.695 |
ABM45260.1 | ybeY | BARBAKC583_1242 | BARBAKC583_1245 | Ribosomal-protein-alanine acetyltransferase; Identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575. | Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.570 |
ABM45694.1 | miaB | BARBAKC583_1045 | BARBAKC583_1243 | Conserved hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.598 |
ABM45694.1 | prfA | BARBAKC583_1045 | BARBAKC583_0359 | Conserved hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.592 |
miaB | ABM45029.1 | BARBAKC583_1243 | BARBAKC583_1337 | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.407 |
miaB | ABM45079.1 | BARBAKC583_1243 | BARBAKC583_1244 | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | Identified by match to protein family HMM PF02562. | 0.514 |
miaB | ABM45248.1 | BARBAKC583_1243 | BARBAKC583_1241 | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | Identified by match to protein family HMM PF00814. | 0.708 |
miaB | ABM45260.1 | BARBAKC583_1243 | BARBAKC583_1242 | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | Ribosomal-protein-alanine acetyltransferase; Identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575. | 0.695 |