STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT98315.2Putative membrane protein, CvpA family; Pfam match to PF02674.11 Colicin_V. (205 aa)    
Predicted Functional Partners:
EAT98391.1
Hypothetical protein.
 
    0.918
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
  
 0.903
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Pfam match to PF01259.13 SAICAR_synt; Belongs to the SAICAR synthetase family.
  
    0.829
fur
Ferric uptake regulation protein; Pfam match to PF01475.14 FUR; Belongs to the Fur family.
 
     0.827
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
    0.818
purM
Phosphoribosylformylglycinamide cyclo-ligase; Pfam matches to PF02769.17 AIRS_C, and to PF00586.19 AIRS.
   
    0.814
gatC
Glu-tRNA(Gln) amidotransferase, subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
       0.800
ABW74819.1
Type II/IV secretion system protein, PilT/PilU family; Pfam match to PF00437.15 T2SE.
       0.800
lysS
lysyl-tRNA synthetase; Pfam matches to PF00152.15 tRNA-synt_2, and to PF01336.20 tRNA_anti-codon; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.800
EAT98398.1
Putative protein (DUF1882 domain); Pfam match to PF08966.6 DUF1882.
       0.800
Your Current Organism:
Campylobacter concisus
NCBI taxonomy Id: 360104
Other names: C. concisus 13826, Campylobacter concisus 13826, Campylobacter concisus str. 13826, Campylobacter concisus strain 13826
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.