STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT98017.1Co/Zn/Cd efflux system component; Pfam match to PF01545.16 Cation_efflux. (306 aa)    
Predicted Functional Partners:
EAT97976.1
ABC transporter, ATP-binding/permease protein; Pfam match to PF13748.1 ABC_membrane_3.
       0.775
EAT98010.1
Putative membrane protein.
       0.686
ABW74772.1
Cation diffusion facilitator family transporter; Pfam match to PF01545.16 Cation_efflux; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
 
0.606
EAT97974.1
Cupin domain-containing protein; Pfam match to PF07883.6 Cupin_2.
       0.523
lepA
Leader peptidase A; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
  
  
 0.505
copA
Copper-translocating P-type ATPase; Pfam matches to PF00122.15 E1-E2_ATPase, and to PF00702.21 Hydrolase, and to PF00403.21 HMA, and to PF12710.2 HAD.
 
  
 0.453
EAT98937.1
Heavy-metal-associated domain protein, putative copper metallochaperone CopZ; Pfam match to PF00403.21 HMA.
     
 0.428
Your Current Organism:
Campylobacter concisus
NCBI taxonomy Id: 360104
Other names: C. concisus 13826, Campylobacter concisus 13826, Campylobacter concisus str. 13826, Campylobacter concisus strain 13826
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