STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP12827.1Membrane carboxypeptidase. (959 aa)    
Predicted Functional Partners:
GAP12826.1
Protein containg TPR repeat.
       0.776
GAP12300.1
Cell division protein FtsI/penicillin-binding protein 2.
  
 
 
 0.771
GAP14278.1
Cell division-specific peptidoglycan biosynthesis regulator FtsW; Belongs to the SEDS family.
  
   
 0.747
GAP14282.1
Cell division protein FtsI/penicillin-binding protein 2.
  
 
 
 0.736
GAP14213.1
Soluble lytic murein transglycosylase.
 
   
 0.725
GAP14871.1
Bacterial cell division membrane protein; Belongs to the SEDS family.
  
   
 0.714
GAP14875.1
Peptidoglycan glycosyltransferase.
  
 
 
 0.704
GAP15133.1
Bacterial cell division membrane protein; Belongs to the SEDS family.
 
 
 
 0.639
GAP15016.1
Baseplate J-like protein.
  
     0.588
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
   
 0.573
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.