STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAP13300.1Putative protein-S-isoprenylcysteine methyltransferase. (229 aa)    
Predicted Functional Partners:
GAP13299.1
ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
  
    0.724
GAP13298.1
Predicted ATPase.
       0.718
GAP16001.1
Putative protein-S-isoprenylcysteine methyltransferase.
  
     0.703
GAP14140.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.693
GAP14141.1
Methionine synthase I.
    
  0.686
GAP13697.1
Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
   
 
  0.555
GAP13301.1
Short-chain alcohol dehydrogenase of unknown specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.545
GAP12995.1
Methyltransferase; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
 
     0.521
GAP12685.1
Acetyltransferases.
  
    0.487
GAP14820.1
Rhodanese-related sulfurtransferase.
    
  0.429
Your Current Organism:
Longilinea arvoryzae
NCBI taxonomy Id: 360412
Other names: JCM 13670, KTCC 5380, L. arvoryzae, Longilinea arvoryzae Yamada et al. 2007, anaerobic filamentous bacterium KOME-1, strain KOME-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.