Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BAV0209 | BAV1312A | Putative DNA-binding protein. | Putative phage protein. | 0.535 |
BAV0209 | BAV1486 | Putative DNA-binding protein. | Conserved hypothetical protein. | 0.771 |
BAV1312 | BAV1312A | Putative phage DNA-binding protein. | Putative phage protein. | 0.946 |
BAV1312 | BAV1313 | Putative phage DNA-binding protein. | Putative phage small subunit terminase. | 0.557 |
BAV1312 | BAV1314 | Putative phage DNA-binding protein. | Putative phage large subunit terminase; Start codon not provided. | 0.557 |
BAV1312 | BAV1315 | Putative phage DNA-binding protein. | Putative phage portal protein. | 0.557 |
BAV1312 | BAV1316 | Putative phage DNA-binding protein. | Putative phage head protein. | 0.557 |
BAV1312 | BAV1317 | Putative phage DNA-binding protein. | Phage protein. | 0.557 |
BAV1312 | BAV1318 | Putative phage DNA-binding protein. | Phage structural protein; No significant database matches;encodes major structural protein, as shown by N-terminal sequencing of purified protein in L. Temple's lab. | 0.557 |
BAV1312 | BAV1319 | Putative phage DNA-binding protein. | Putative phage protein. | 0.530 |
BAV1312A | BAV0209 | Putative phage protein. | Putative DNA-binding protein. | 0.535 |
BAV1312A | BAV1312 | Putative phage protein. | Putative phage DNA-binding protein. | 0.946 |
BAV1312A | BAV1313 | Putative phage protein. | Putative phage small subunit terminase. | 0.557 |
BAV1312A | BAV1314 | Putative phage protein. | Putative phage large subunit terminase; Start codon not provided. | 0.557 |
BAV1312A | BAV1315 | Putative phage protein. | Putative phage portal protein. | 0.557 |
BAV1312A | BAV1316 | Putative phage protein. | Putative phage head protein. | 0.557 |
BAV1312A | BAV1317 | Putative phage protein. | Phage protein. | 0.557 |
BAV1312A | BAV1318 | Putative phage protein. | Phage structural protein; No significant database matches;encodes major structural protein, as shown by N-terminal sequencing of purified protein in L. Temple's lab. | 0.557 |
BAV1312A | BAV1319 | Putative phage protein. | Putative phage protein. | 0.530 |
BAV1312A | BAV1486 | Putative phage protein. | Conserved hypothetical protein. | 0.601 |
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