STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV1804Putative lipoprotein; No significant database matches. (659 aa)    
Predicted Functional Partners:
BAV3379
Putative membrane protein.
  
     0.766
BAV0388
Hypothetical protein.
  
     0.749
gspJ
General secretion pathway protein J.
  
     0.731
gspH
General secretion pathway protein H.
  
     0.722
gspN
General secretion pathway protein N.
  
     0.713
dltD
Putative D-alanine transferase.
  
     0.700
BAV0691
Putative membrane protein.
  
     0.699
plcN2
Non-hemolytic phospholipase C; Start codon not provided; Also similar to BAV1084 (49.7 38d.).
 
     0.689
BAV2674
Putative membrane protein.
 
     0.689
BAV2248
Conserved hypothetical protein.
  
 
 0.676
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.