rplI protein (Exiguobacterium sp. AT1b) - STRING interaction network

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rplI

Ribosomal protein L9; Binds to the 23S rRNA. (147 aa)

Predicted Functional Partners:

rpsR

0.996

rpsF

0.994

rplQ

0.993

rplD

0.993

rplU

0.993

rpsD

0.992

rpsI

0.992

rplV

0.992

rplJ

0.992

rplT

0.991

Your Current Organism:

Exiguobacterium sp. AT1b

NCBI taxonomy Id: 360911
Other names: E. sp. AT1b

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplD	rplI	EAT1b_1632	EAT1b_1749	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein L9; Binds to the 23S rRNA.	0.993
rplD	rplJ	EAT1b_1632	EAT1b_1644	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.997
rplD	rplQ	EAT1b_1632	EAT1b_1605	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: bcu:BCAH820_0151 ribosomal protein L17.	0.995
rplD	rplT	EAT1b_1632	EAT1b_0646	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.993
rplD	rplU	EAT1b_1632	EAT1b_2678	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.992
rplD	rplV	EAT1b_1632	EAT1b_1628	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity).	0.999
rplD	rpsD	EAT1b_1632	EAT1b_0691	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.998
rplD	rpsF	EAT1b_1632	EAT1b_1745	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.991
rplD	rpsI	EAT1b_1632	EAT1b_1599	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	PFAM: ribosomal protein S9; KEGG: bha:BH0169 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.994
rplD	rpsR	EAT1b_1632	EAT1b_1747	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.993
rplI	rplD	EAT1b_1749	EAT1b_1632	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L4/L1e; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.	0.993
rplI	rplJ	EAT1b_1749	EAT1b_1644	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.992
rplI	rplQ	EAT1b_1749	EAT1b_1605	Ribosomal protein L9; Binds to the 23S rRNA.	TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: bcu:BCAH820_0151 ribosomal protein L17.	0.993
rplI	rplT	EAT1b_1749	EAT1b_0646	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.991
rplI	rplU	EAT1b_1749	EAT1b_2678	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.993
rplI	rplV	EAT1b_1749	EAT1b_1628	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity).	0.992
rplI	rpsD	EAT1b_1749	EAT1b_0691	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.992
rplI	rpsF	EAT1b_1749	EAT1b_1745	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.994
rplI	rpsI	EAT1b_1749	EAT1b_1599	Ribosomal protein L9; Binds to the 23S rRNA.	PFAM: ribosomal protein S9; KEGG: bha:BH0169 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.992
rplI	rpsR	EAT1b_1749	EAT1b_1747	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.996