STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HQ_2749ASensor box histidine kinase. (411 aa)    
Predicted Functional Partners:
fadA
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.758
HQ_1085A
Bis-gamma-glutamylcystine reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
    
 0.651
prsA
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P).
  
 0.647
degP
Probable periplasmic serine protease.
  
  
 0.625
boa
Sensor/bat box HTH-10 family transcription regulator.
  
  
 0.605
kef1
Kef-type transport system.
   
 
 0.588
pcn
DNA polymerase sliding clamp; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. Belongs to the PCNA family.
  
  
 0.551
HQ_2750A
Receiver/bat box HTH-10 family transcription regulator; Gene truncated at the N-terminus; product: IS1341-type transposase (nonfunctional).
   
 
 0.521
dnaK
Hsp70-type molecular chaperone DnaK; Acts as a chaperone.
   
 0.459
HQ_2141A
Receiver/sensor box histidine kinase.
   
 
 0.456
Your Current Organism:
Haloquadratum walsbyi DSM 16790
NCBI taxonomy Id: 362976
Other names: H. walsbyi DSM 16790, Haloquadratum walsbyi str. DSM 16790, Haloquadratum walsbyi strain DSM 16790
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.