STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sodCSuperoxide dismutase precursor (Cu-Zn); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. (180 aa)    
Predicted Functional Partners:
LI0614
Thiol-disulfide isomerase and thioredoxins.
   
 0.878
katE
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.784
rubY
Rubrerythrin.
      
 0.629
dnaK-2
Molecular chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.561
LI0006
NA.
       0.556
LI1159
NA.
      
 0.549
LI0447
NA.
      
 0.511
LI0460
Putative outer membrane protein.
   
   0.509
trxA
Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family.
      
 0.497
rpsJ
Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
  
 0.436
Your Current Organism:
Lawsonia intracellularis
NCBI taxonomy Id: 363253
Other names: L. intracellularis PHE/MN1-00, Lawsonia intracellularis PHE/MN1-00, Lawsonia intracellularis str. PHE/MN1-00, Lawsonia intracellularis strain PHE/MN1-00
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.