Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LI0330 | amyA | LI0330 | LI0331 | Putative glycosyltransferase. | Alpha-amylase. | 0.949 |
LI0330 | glgP | LI0330 | LI0332 | Putative glycosyltransferase. | Carbohydrate phosphorylase family protein. | 0.925 |
LI0330 | glgX | LI0330 | LI0329 | Putative glycosyltransferase. | Glyen debranching enzyme. | 0.937 |
LI0580 | galU | LI0580 | LI0193 | Nucleoside-diphosphate-sugar epimerases. | UDP-glucose pyrophosphorylase. | 0.817 |
LI0580 | glgP | LI0580 | LI0332 | Nucleoside-diphosphate-sugar epimerases. | Carbohydrate phosphorylase family protein. | 0.852 |
LI0674 | galU | LI0674 | LI0193 | Unnamed protein product. | UDP-glucose pyrophosphorylase. | 0.971 |
LI0674 | glgP | LI0674 | LI0332 | Unnamed protein product. | Carbohydrate phosphorylase family protein. | 0.976 |
LI0674 | pgi | LI0674 | LI0879 | Unnamed protein product. | Glucose-6-phosphate isomerase. | 0.923 |
LI0674 | polB-2 | LI0674 | LI0102 | Unnamed protein product. | DNA polymerase I-3'-5' exonuclease and polymerase domains. | 0.512 |
amyA | LI0330 | LI0331 | LI0330 | Alpha-amylase. | Putative glycosyltransferase. | 0.949 |
amyA | glgP | LI0331 | LI0332 | Alpha-amylase. | Carbohydrate phosphorylase family protein. | 0.992 |
amyA | glgX | LI0331 | LI0329 | Alpha-amylase. | Glyen debranching enzyme. | 0.936 |
eno | glgP | LI0091 | LI0332 | Enolase (2-phosphoglycerate dehydratase); Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Carbohydrate phosphorylase family protein. | 0.885 |
eno | pfp | LI0091 | LI0052 | Enolase (2-phosphoglycerate dehydratase); Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily. | 0.895 |
eno | pgi | LI0091 | LI0879 | Enolase (2-phosphoglycerate dehydratase); Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Glucose-6-phosphate isomerase. | 0.979 |
eno | polB-2 | LI0091 | LI0102 | Enolase (2-phosphoglycerate dehydratase); Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | DNA polymerase I-3'-5' exonuclease and polymerase domains. | 0.546 |
galU | LI0580 | LI0193 | LI0580 | UDP-glucose pyrophosphorylase. | Nucleoside-diphosphate-sugar epimerases. | 0.817 |
galU | LI0674 | LI0193 | LI0674 | UDP-glucose pyrophosphorylase. | Unnamed protein product. | 0.971 |
galU | glgP | LI0193 | LI0332 | UDP-glucose pyrophosphorylase. | Carbohydrate phosphorylase family protein. | 0.940 |
galU | pgi | LI0193 | LI0879 | UDP-glucose pyrophosphorylase. | Glucose-6-phosphate isomerase. | 0.602 |
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