STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107926825Myosin-9-like; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1527 aa)    
Predicted Functional Partners:
LOC107932590
Ethylene-responsive transcription factor RAP2-10-like.
  
  0.456
LOC107889787
Embryonic protein DC-8-like.
   
 0.427
LOC107908729
Embryonic protein DC-8-like.
   
 0.427
LOC107945368
Actin-related protein 4; Belongs to the actin family.
    
 0.426
LOC107893574
Mitochondrial Rho GTPase 2-like.
    
 0.422
LOC107894362
Mitochondrial Rho GTPase.
    
 0.422
LOC107899108
Mitochondrial Rho GTPase.
    
 0.422
LOC107906790
Mitochondrial Rho GTPase 1-like isoform X1.
    
 0.422
LOC107907975
Mitochondrial Rho GTPase 1-like.
    
 0.422
LOC107914565
Mitochondrial Rho GTPase.
    
 0.422
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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