STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107963207Xylose isomerase. (493 aa)    
Predicted Functional Partners:
LOC107905188
Xylulose kinase-like.
  
 
 0.995
LOC107957865
Xylulose kinase-like.
  
 
 0.995
LOC107892058
Sorbitol dehydrogenase-like.
     
 0.938
LOC107936471
Sorbitol dehydrogenase.
     
 0.938
LOC107947282
Sorbitol dehydrogenase-like.
     
 0.938
LOC107904426
Xylose isomerase.
  
  
 
0.901
LOC107904720
Xylose isomerase.
  
  
 
0.901
LOC107928099
Beta-galactosidase-like; Belongs to the glycosyl hydrolase 2 family.
    
 0.868
LOC107962353
Beta-galactosidase-like; Belongs to the glycosyl hydrolase 2 family.
    
 0.868
LOC107900940
Xylulose kinase-like.
  
 
 0.853
Your Current Organism:
Gossypium hirsutum
NCBI taxonomy Id: 3635
Other names: American cotton, American upland cotton, G. hirsutum, Gossypium hirsutum L., Gossypium hirsutum subsp. mexicanum, Gossypium hirsutum subsp. mexicanum (Tod.) Mauer, Gossypium lanceolatum, Gossypium lanceolatum Tod., Gossypium purpurascens, Gossypium purpurascens Poir., cotton
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.