STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIO08083.1Chemotaxis protein MotB. (251 aa)    
Predicted Functional Partners:
SIO08139.1
Chemotaxis protein MotA.
 
 0.998
SIN96200.1
Chemotaxis protein MotA.
   
 0.985
SIO07806.1
Chemotaxis protein MotA.
   
 0.964
SIN78217.1
Two-component system, chemotaxis family, response regulator CheV.
  
  
 0.899
SIO11703.1
Two-component system, chemotaxis family, response regulator CheV.
  
  
 0.899
SIO08112.1
Chemotaxis protein MotB.
 
    
0.828
SIO08166.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.773
SIO08195.1
D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; Belongs to the gmhB family.
       0.773
glyS
glycyl-tRNA synthetase beta chain.
       0.773
glyQ
glycyl-tRNA synthetase alpha chain.
       0.773
Your Current Organism:
Sulfurivirga caldicuralii
NCBI taxonomy Id: 364032
Other names: DSM 17737, JCM 13439, S. caldicuralii, Sulfurivirga caldicuralii Takai et al. 2006, strain MM1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.