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TCM_000895 protein (Theobroma cacao) - STRING interaction network
"TCM_000895" - Basic helix-loop-helix DNA-binding superfamily protein, putative in Theobroma cacao
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCM_000895Basic helix-loop-helix DNA-binding superfamily protein, putative (362 aa)    
Predicted Functional Partners:
TCM_039471
Basic helix-loop-helix DNA-binding superfamily protein isoform 1 (317 aa)
       
 
0.537
TCM_006871
Cryptochrome-interacting basic-helix-loop-helix 1, putative isoform 6 (440 aa)
           
  0.420
TCM_000362
Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 3 (385 aa)
           
  0.420
TCM_019210
Rhd six-like 1, putative (324 aa)
           
  0.416
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao, cacao, chocolate, cocoa
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