STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW39266.1Hemolysin-type calcium-binding repeat-containing protein. (487 aa)    
Predicted Functional Partners:
SEW00756.1
Serralysin.
 
  0.865
SEW12046.1
Hemolysin-type calcium-binding repeat-containing protein.
 
     0.775
SEW32406.1
Ca2+-binding protein, RTX toxin-related.
  
     0.772
SEW20547.1
Hint domain-containing protein.
  
     0.766
SEW42007.1
HlyD family secretion protein.
 
    0.743
SEW41999.1
ATP-binding cassette, subfamily C.
 
   0.679
SEW01002.1
Membrane fusion protein, adhesin transport system.
 
    0.666
SEW39346.1
HlyD family secretion protein.
 
  
 0.629
SEW09656.1
Serralysin.
 
 
0.599
SEW42680.1
Ca2+-binding protein, RTX toxin-related.
 
 
0.599
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.