node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pnap_1867 | aroA | Pnap_1867 | Pnap_2795 | PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: pol:Bpro_2613 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily. | 0.555 |
Pnap_1867 | der | Pnap_1867 | Pnap_1876 | PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: pol:Bpro_2613 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.832 |
Pnap_1867 | rlmN | Pnap_1867 | Pnap_1869 | PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: pol:Bpro_2613 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | 23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.673 |
Pnap_1874 | bamB | Pnap_1874 | Pnap_1875 | KEGG: pol:Bpro_2606 hypothetical protein. | Pyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.966 |
Pnap_1874 | der | Pnap_1874 | Pnap_1876 | KEGG: pol:Bpro_2606 hypothetical protein. | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.814 |
Pnap_1874 | rlmN | Pnap_1874 | Pnap_1869 | KEGG: pol:Bpro_2606 hypothetical protein. | 23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.623 |
Pnap_2786 | aroA | Pnap_2786 | Pnap_2795 | PFAM: pseudouridine synthase; KEGG: pol:Bpro_1800 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily. | 0.659 |
Pnap_2786 | der | Pnap_2786 | Pnap_1876 | PFAM: pseudouridine synthase; KEGG: pol:Bpro_1800 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.782 |
aroA | Pnap_1867 | Pnap_2795 | Pnap_1867 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily. | PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: pol:Bpro_2613 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | 0.555 |
aroA | Pnap_2786 | Pnap_2795 | Pnap_2786 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily. | PFAM: pseudouridine synthase; KEGG: pol:Bpro_1800 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | 0.659 |
aroA | der | Pnap_2795 | Pnap_1876 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily. | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.957 |
aroA | ffh | Pnap_2795 | Pnap_3379 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily. | Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the i [...] | 0.585 |
aroA | gpsA | Pnap_2795 | Pnap_0931 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily. | PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: pol:Bpro_0890 glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.550 |
bamB | Pnap_1874 | Pnap_1875 | Pnap_1874 | Pyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | KEGG: pol:Bpro_2606 hypothetical protein. | 0.966 |
bamB | der | Pnap_1875 | Pnap_1876 | Pyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.833 |
bamB | rlmN | Pnap_1875 | Pnap_1869 | Pyrrolo-quinoline quinone; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.614 |
der | Pnap_1867 | Pnap_1876 | Pnap_1867 | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: pol:Bpro_2613 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | 0.832 |
der | Pnap_1874 | Pnap_1876 | Pnap_1874 | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | KEGG: pol:Bpro_2606 hypothetical protein. | 0.814 |
der | Pnap_2786 | Pnap_1876 | Pnap_2786 | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | PFAM: pseudouridine synthase; KEGG: pol:Bpro_1800 pseudouridine synthase, Rsu; Belongs to the pseudouridine synthase RsuA family. | 0.782 |
der | aroA | Pnap_1876 | Pnap_2795 | Small GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate; Belongs to the cytidylate kinase family. Type 1 subfamily. | 0.957 |