STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnap_2418Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates (387 aa)    
Predicted Functional Partners:
Pnap_2421
PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: rfr:Rfer_1780 NADPH-dependent FMN reductase
 
 0.993
Pnap_2419
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein, family 3; KEGG: rfr:Rfer_1778 ABC transporter, substrate-binding protein, aliphatic sulphonates
 
 0.988
Pnap_2417
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_1776 binding-protein-dependent transport systems inner membrane component
 
 0.987
Pnap_2420
KEGG: reu:Reut_A1977 ABC transporter, substrate-binding protein, aliphatic sulphonates; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NLPA lipoprotein; Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein, family 3
 
 0.985
Pnap_2416
Sulfonate transport system atp-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system
 
 
 0.984
Pnap_0558
PFAM: NADPH-dependent FMN reductase; KEGG: pfo:Pfl_3915 FMN reductase
 
 0.972
Pnap_0544
TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein, family 3; KEGG: pae:PA3449 putative sulfonate transport system substrate-binding protein
 
 0.924
Pnap_1539
Chromate reductase, nad(p)h dehydrogenase (quinone); PFAM: NADPH-dependent FMN reductase; KEGG: pol:Bpro_2371 NADPH-dependent FMN reductase
  
 0.922
Pnap_2585
Arsenical resistance protein arsh; PFAM: NADPH-dependent FMN reductase; KEGG: pol:Bpro_2220 NADPH-dependent FMN reductase
  
 0.922
Pnap_2427
PFAM: nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: pol:Bpro_2339 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like
     
 0.915
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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