STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagDPFAM: DSBA oxidoreductase; KEGG: rfr:Rfer_2632 DsbA oxidoreductase. (197 aa)    
Predicted Functional Partners:
nagE
PFAM: dihydrodipicolinate synthetase; KEGG: mmc:Mmcs_1629 dihydrodipicolinate synthetase; Belongs to the DapA family.
 
  
 0.974
nagC
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mmc:Mmcs_1630 glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
  0.941
Pnap_0479
PFAM: DSBA oxidoreductase; KEGG: pol:Bpro_4153 DsbA oxidoreductase.
  
     0.774
Pnap_2484
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: ssn:SSO_2621 small terminal subunit of phenylpropionate dioxygenase.
 
     0.607
nagJ
PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: bxe:Bxe_C1190 glutathione S-transferase (BphK); Belongs to the GST superfamily.
 
     0.594
nagAc
PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: sbo:SBO_2562 large terminal subunit of phenylpropionate dioxygenase.
 
     0.507
Pnap_2488
Rieske (2Fe-2S) domain protein; PFAM: ring hydroxylating dioxygenase, alpha subunit; Rieske [2Fe-2S] domain protein; KEGG: pol:Bpro_0983 Rieske (2Fe-2S) region.
 
     0.447
nagH
PFAM: aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: pol:Bpro_0984 aromatic-ring-hydroxylating dioxygenase, beta subunit.
 
     0.436
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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