STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagX3-hydroxybenzoate 6-hydroxylase; Catalyzes the NAD- or NADP-dependent conversion of 3- hydroxybenzoate to gentisate. The affinity of the enzyme toward NAD is twice as high as for NADP. (400 aa)    
Predicted Functional Partners:
Pnap_3145
Gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel domain protein; KEGG: eba:ebA1373 gentisate 1,2-dioxygenase.
 
   
 0.920
Pnap_2454
Gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel domain protein; KEGG: eba:ebA1373 gentisate 1,2-dioxygenase.
 
   
 0.788
nagI
Gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel domain protein; KEGG: eba:ebA1373 gentisate 1,2-dioxygenase.
 
   
 0.788
nagL
TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase, N-terminal domain; KEGG: eba:ebA1379 maleylpyruvate isomerase.
 
   
 0.666
Pnap_1616
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; KEGG: pol:Bpro_3084 inner-membrane translocator; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
   
    0.636
Pnap_3143
PFAM: regulatory protein, MarR; KEGG: bja:bll0108 transcriptional regulatory protein.
 
  
 0.605
Pnap_3146
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: eba:ebA1377 fumarylpyruvate hydrolase.
  
  
 0.580
Pnap_3521
PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_A3706 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; TC 3.A.1.4.-.
  
    0.494
Pnap_0961
ATP-dependent Clp protease proteolytic subunit ClpP; PFAM: peptidase S14, ClpP; KEGG: sdn:Sden_3249 peptidase S14, ClpP; Belongs to the peptidase S14 family.
  
 
 0.425
Pnap_2252
KEGG: stm:STM1034 putative RecA/RadA recombinase.
  
     0.407
Your Current Organism:
Polaromonas naphthalenivorans
NCBI taxonomy Id: 365044
Other names: P. naphthalenivorans CJ2, Polaromonas naphthalenivorans CJ2, Polaromonas naphthalenivorans str. CJ2, Polaromonas naphthalenivorans strain CJ2
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