node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplM | rplU | Pnap_0500 | Pnap_0751 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.981 |
rplM | rpmB | Pnap_0500 | Pnap_3214 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein L28; KEGG: pol:Bpro_3802 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.978 |
rplM | rpmF | Pnap_0500 | Pnap_3078 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: pol:Bpro_3652 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.977 |
rplM | rpmH | Pnap_0500 | Pnap_4116 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein L34; KEGG: pol:Bpro_4908 ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.975 |
rplM | rpmI | Pnap_0500 | Pnap_2852 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein L35; KEGG: pol:Bpro_2104 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.979 |
rplM | rpsN | Pnap_0500 | Pnap_0333 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.985 |
rplM | rpsO | Pnap_0500 | Pnap_1419 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.989 |
rplM | rpsP | Pnap_0500 | Pnap_1461 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein S16; KEGG: pol:Bpro_1690 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.984 |
rplM | rpsT | Pnap_0500 | Pnap_3009 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.980 |
rplM | rpsU | Pnap_0500 | Pnap_1388 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein S21; KEGG: pol:Bpro_3284 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.976 |
rplU | rplM | Pnap_0751 | Pnap_0500 | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.981 |
rplU | rpmB | Pnap_0751 | Pnap_3214 | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | PFAM: ribosomal protein L28; KEGG: pol:Bpro_3802 ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.980 |
rplU | rpmF | Pnap_0751 | Pnap_3078 | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: pol:Bpro_3652 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.980 |
rplU | rpmH | Pnap_0751 | Pnap_4116 | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | PFAM: ribosomal protein L34; KEGG: pol:Bpro_4908 ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.978 |
rplU | rpmI | Pnap_0751 | Pnap_2852 | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | PFAM: ribosomal protein L35; KEGG: pol:Bpro_2104 ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.976 |
rplU | rpsN | Pnap_0751 | Pnap_0333 | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.978 |
rplU | rpsO | Pnap_0751 | Pnap_1419 | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | SSU ribosomal protein S15P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.981 |
rplU | rpsP | Pnap_0751 | Pnap_1461 | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | PFAM: ribosomal protein S16; KEGG: pol:Bpro_1690 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.983 |
rplU | rpsT | Pnap_0751 | Pnap_3009 | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.979 |
rplU | rpsU | Pnap_0751 | Pnap_1388 | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | PFAM: ribosomal protein S21; KEGG: pol:Bpro_3284 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. | 0.977 |