STRINGSTRING
CMe-ERF1 protein (Cucumis melo) - STRING interaction network
"CMe-ERF1" - Ethylene-responsive transcription factor ERF106-like in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMe-ERF1Ethylene-responsive transcription factor ERF106-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments (187 aa)    
Predicted Functional Partners:
XP_008462867.1
Homeobox protein BEL1 homolog isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (817 aa)
       
 
  0.630
XP_008461100.1
BEL1-like homeodomain protein 7 (548 aa)
       
 
  0.629
XP_008448414.1
BEL1-like homeodomain protein 9 isoform X1 (464 aa)
       
 
  0.424
XP_008442501.1
BEL1-like homeodomain protein 9 (479 aa)
       
 
  0.424
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (7%) [HD]