STRINGSTRING
XP_008436987.1 protein (Cucumis melo) - STRING interaction network
"XP_008436987.1" - Uncharacterized protein LOC103482552 in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008436987.1Uncharacterized protein LOC103482552; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 11 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (335 aa)    
Predicted Functional Partners:
XP_008437092.1
Vesicle-associated protein 1-2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 12 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns (241 aa)
 
   
      0.639
XP_008463641.1
NAC domain-containing protein 89-like isoform X1 (367 aa)
       
      0.586
XP_008449939.1
NAC domain-containing protein 89 (487 aa)
       
      0.586
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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