STRINGSTRING
XP_008436994.1 protein (Cucumis melo) - STRING interaction network
"XP_008436994.1" - Probable prolyl 4-hydroxylase 12 in Cucumis melo
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008436994.1Probable prolyl 4-hydroxylase 12; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (311 aa)    
Predicted Functional Partners:
XP_008465221.1
phytanoyl-CoA dioxygenase isoform X1 (282 aa)
           
  0.853
XP_008461371.1
Endoglucanase 5; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns; Belongs to the glycosyl hydrolase 9 (cellulase E) family (619 aa)
           
  0.748
XP_008460200.1
Endoglucanase 13-like (492 aa)
           
  0.737
XP_008460452.1
4-coumarate--CoA ligase-like 6 (554 aa)
           
  0.691
XP_008455688.1
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family (276 aa)
         
  0.651
XP_008459446.1
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate (545 aa)
         
    0.650
XP_008454439.1
Proline iminopeptidase; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns (394 aa)
         
    0.650
XP_008462692.1
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1 (1083 aa)
     
        0.641
XP_008446022.1
4-coumarate--CoA ligase-like 1 (596 aa)
           
  0.577
XP_008463063.1
4-coumarate--CoA ligase-like 7; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns (543 aa)
           
  0.573
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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