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XP_008437005.1 protein (Cucumis melo) - STRING interaction network
"XP_008437005.1" - Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437005.1Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (382 aa)    
Predicted Functional Partners:
XP_008454910.1
Pentatricopeptide repeat-containing protein At3g02330 isoform X1 (886 aa)
     
 
  0.790
XP_008441245.1
Pentatricopeptide repeat-containing protein At4g18520; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (624 aa)
       
 
  0.704
XP_008462579.1
Putative pentatricopeptide repeat-containing protein At3g11460; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments (623 aa)
       
 
  0.650
XP_008456000.1
Rhodanese-like domain-containing protein 14, chloroplastic (237 aa)
           
  0.630
XP_008466230.1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX (549 aa)
       
 
  0.626
XP_008439477.1
Glycine-rich RNA-binding protein 4, mitochondrial-like (176 aa)
           
  0.607
XP_008438671.1
Pentatricopeptide repeat-containing protein At4g14850; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (606 aa)
       
 
  0.511
XP_008454580.1
Glycine-rich RNA-binding protein 4, mitochondrial (173 aa)
     
   
  0.470
XP_008454941.1
Pentatricopeptide repeat-containing protein At2g15690; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (628 aa)
     
 
  0.467
XP_008457379.1
Pentatricopeptide repeat-containing protein At2g29760, chloroplastic (733 aa)
       
 
  0.452
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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