STRINGSTRING
XP_008437006.1 protein (Cucumis melo) - STRING interaction network
"XP_008437006.1" - Ceramide kinase isoform X1 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437006.1Ceramide kinase isoform X1 (588 aa)    
Predicted Functional Partners:
XP_008457252.1
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide (979 aa)
         
  0.977
XP_008464753.1
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide (952 aa)
         
  0.969
XP_008464893.1
Neutral ceramidase-like (748 aa)
     
  0.965
XP_008464071.1
Neutral ceramidase-like isoform X1 (802 aa)
     
  0.965
XP_008457412.1
Neutral ceramidase-like isoform X1 (779 aa)
     
  0.965
XP_008466022.1
LAG1 longevity assurance homolog 3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (308 aa)
     
 
  0.962
XP_008459592.1
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide (944 aa)
         
  0.959
XP_008442400.1
Sphingolipid delta(4)-desaturase DES1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (324 aa)
         
  0.955
XP_008458024.1
Accelerated cell death 11; Ceramide-1-phosphate transfer protein (204 aa)
           
  0.901
XP_008444597.1
Long chain base biosynthesis protein 1 isoform X1 (483 aa)
     
 
  0.876
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (7%) [HD]