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XP_008437015.1 protein (Cucumis melo) - STRING interaction network
"XP_008437015.1" - U-box domain-containing protein 35-like isoform X1 in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
XP_008437015.1U-box domain-containing protein 35-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (820 aa)    
Predicted Functional Partners:
XP_008462692.1
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1 (1083 aa)
   
 
  0.596
XP_008442223.1
Serine/threonine-protein kinase RHS3-like; Protein kinase PVPK-1-like isoform X1 (581 aa)
       
 
  0.571
XP_008441978.1
Uncharacterized protein LOC103485979 (708 aa)
       
 
  0.536
XP_008458062.1
Serine/threonine-protein kinase OXI1-like (426 aa)
       
 
  0.526
XP_008454297.1
Universal stress protein A-like protein; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 10 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns (167 aa)
     
   
  0.493
XP_008465737.1
Anaphase-promoting complex subunit 2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns; Belongs to the cullin family (886 aa)
       
 
  0.467
XP_008446127.1
Uncharacterized protein LOC103488945; Belongs to the glycosyl hydrolase 5 (cellulase A) family (554 aa)
           
  0.422
XP_008442491.1
Uncharacterized protein C167.05 (164 aa)
           
  0.420
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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