STRINGSTRING
XP_008437053.1 protein (Cucumis melo) - STRING interaction network
"XP_008437053.1" - Uncharacterized protein LOC103482594 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437053.1Uncharacterized protein LOC103482594; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns (281 aa)    
Predicted Functional Partners:
XP_008448826.1
E3 ubiquitin-protein ligase RBBP6-like isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 16 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (867 aa)
           
  0.696
XP_008445533.1
Uncharacterized protein LOC103488521 isoform X1 (726 aa)
           
  0.573
XP_008453903.1
60S ribosomal protein L15-2; Belongs to the eukaryotic ribosomal protein eL15 family (204 aa)
           
  0.547
XP_008452210.1
Ribosomal protein L15; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments; Belongs to the eukaryotic ribosomal protein eL15 family (204 aa)
           
  0.547
XP_008437056.1
60S ribosomal protein L15-2 isoform X1 (214 aa)
           
  0.547
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (10%) [HD]