STRINGSTRING
XP_008437063.1 protein (Cucumis melo) - STRING interaction network
"XP_008437063.1" - VAN3-binding protein-like in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437063.1VAN3-binding protein-like; Uncharacterized protein LOC103482602 (385 aa)    
Predicted Functional Partners:
XP_008452548.1
Coenzyme Q-binding protein COQ10 homolog, mitochondrial (252 aa)
           
  0.846
XP_008440179.1
LRR receptor-like serine/threonine-protein kinase GSO1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family (1261 aa)
           
  0.623
XP_008437055.1
DNA mismatch repair protein MSH4 (789 aa)
           
  0.621
XP_008467037.1
Uncharacterized protein LOC103504469 (393 aa)
           
  0.616
XP_008457783.1
Uncharacterized protein LOC103497393 (395 aa)
           
  0.616
XP_008448843.1
Uncharacterized protein LOC103490883 isoform X1 (1421 aa)
           
  0.591
XP_008465891.1
GATA transcription factor 26-like (541 aa)
           
  0.577
XP_008448782.1
GATA transcription factor 26-like isoform X1 (565 aa)
           
  0.577
XP_008442021.1
Uncharacterized protein LOC103486009; Cell cycle checkpoint protein RAD1 (301 aa)
           
  0.572
XP_008437045.1
Uncharacterized protein LOC103482589; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns (246 aa)
           
  0.572
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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