STRINGSTRING
XP_008437072.1 protein (Cucumis melo) - STRING interaction network
"XP_008437072.1" - Metalloendoproteinase 1 in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437072.1Metalloendoproteinase 1; Belongs to the peptidase M10A family (363 aa)    
Predicted Functional Partners:
XP_008460382.1
Uncharacterized protein LOC103499217; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments (354 aa)
           
  0.600
XP_008448751.1
Uncharacterized protein LOC103490823 (146 aa)
           
  0.597
XP_008438278.1
Uncharacterized protein LOC103483439 (106 aa)
           
  0.597
XP_008466241.1
Chitinase 10 (275 aa)
     
   
  0.573
XP_008438248.1
Protoheme IX farnesyltransferase, mitochondrial; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (448 aa)
           
  0.563
XP_008448427.1
Pectinesterase/pectinesterase inhibitor PPE8B-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns (576 aa)
           
  0.487
XP_008465165.1
Respiratory burst oxidase homolog protein C (924 aa)
           
  0.420
XP_008450637.1
Respiratory burst oxidase homolog protein B isoform X1 (889 aa)
           
  0.420
XP_008438510.1
Putative E3 ubiquitin-protein ligase XBAT35 isoform X1 (476 aa)
     
   
  0.401
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (6%) [HD]