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XP_008437098.1 protein (Cucumis melo) - STRING interaction network
"XP_008437098.1" - Autophagy-related protein 8f in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437098.1Autophagy-related protein 8f; Belongs to the ATG8 family (118 aa)    
Predicted Functional Partners:
XP_008451640.1
LOW QUALITY PROTEIN- protein SPIRRIG; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons (3554 aa)
       
 
  0.988
XP_008439746.1
Ubiquitin-like modifier-activating enzyme atg7 (707 aa)
     
  0.981
XP_008441684.1
Cysteine protease ATG4-like isoform X1 (483 aa)
     
  0.975
XP_008438837.1
Protein NBR1 homolog; Uncharacterized protein LOC103483818 (780 aa)
     
 
  0.950
XP_008459789.1
Autophagy-related protein 3; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (315 aa)
     
  0.929
XP_008453898.1
Autophagy-related protein 3 isoform X1 (279 aa)
     
  0.929
XP_008462692.1
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1 (1083 aa)
     
   
  0.866
XP_008439056.1
Protein CbxX, chromosomal; Caseinolytic peptidase B protein homolog (479 aa)
     
 
  0.864
XP_008466469.1
Protein FREE1; Lipoma-preferred partner homolog (566 aa)
     
 
  0.801
XP_008457982.1
E3 ubiquitin-protein ligase PRT1 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (506 aa)
     
 
  0.776
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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