STRINGSTRING
XP_008437115.1 protein (Cucumis melo) - STRING interaction network
"XP_008437115.1" - LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 6.3-like in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437115.1LOW QUALITY PROTEIN- protein NRT1/ PTR FAMILY 6.3-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (591 aa)    
Predicted Functional Partners:
XP_008444632.1
CBL-interacting serine/threonine-protein kinase 23-like isoform X1 (465 aa)
       
 
  0.869
XP_008439597.1
CBL-interacting serine/threonine-protein kinase 23 isoform X1 (455 aa)
       
 
  0.869
XP_008456121.1
Ferredoxin--nitrite reductase, chloroplastic; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 13 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (583 aa)
     
   
  0.729
XP_008439011.1
High-affinity nitrate transporter 3.1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns (213 aa)
           
  0.728
XP_008451916.1
LOW QUALITY PROTEIN- protein NLP7-like; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (992 aa)
           
  0.704
XP_008446183.1
High affinity nitrate transporter 2.5 (505 aa)
           
  0.704
XP_008467040.1
High affinity nitrate transporter 2.4-like (446 aa)
           
  0.631
XP_008442385.1
Ammonium transporter 2 (476 aa)
           
  0.630
XP_008460453.1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (915 aa)
           
  0.578
XP_008444121.1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
           
  0.578
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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