STRINGSTRING
XP_008437155.1 protein (Cucumis melo) - STRING interaction network
"XP_008437155.1" - Deoxyribodipyrimidine photo-lyase in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437155.1Deoxyribodipyrimidine photo-lyase (489 aa)    
Predicted Functional Partners:
XP_008461072.1
(6-4)DNA photolyase isoform X1 (562 aa)
           
  0.977
Cry1
Cryptochrome-1 isoform X1 (681 aa)
           
  0.854
XP_008437555.1
Protein timeless homolog (1195 aa)
       
 
  0.853
XP_008451564.1
Blue-light photoreceptor PHR2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns (451 aa)
           
  0.847
XP_008466332.1
Cryptochrome DASH, chloroplastic/mitochondrial isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns (591 aa)
     
   
  0.835
XP_008459584.1
Uncharacterized protein LOC103498670 isoform X1 (125 aa)
           
  0.755
Cry2
Cryptochrome-1 (633 aa)
           
  0.735
XP_008465894.1
LOW QUALITY PROTEIN- DNA repair endonuclease UVH1; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (1020 aa)
     
   
  0.728
XP_008437702.1
Uncharacterized protein LOC103483047 (652 aa)
           
  0.724
XP_008456281.1
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (523 aa)
   
   
  0.655
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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