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XP_008437162.1 protein (Cucumis melo) - STRING interaction network
"XP_008437162.1" - AT-hook motif nuclear-localized protein 1 in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437162.1AT-hook motif nuclear-localized protein 1; Uncharacterized protein LOC103482669 (330 aa)    
Predicted Functional Partners:
XP_008437157.1
Pentatricopeptide repeat-containing protein At4g22760 (580 aa)
           
  0.600
XP_008448528.1
Uncharacterized protein LOC103490675; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments (128 aa)
           
  0.575
XP_008465804.1
Uncharacterized protein LOC103503399; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns (427 aa)
           
  0.477
XP_008438315.1
Heat stress transcription factor A-5 (467 aa)
           
  0.420
XP_008458226.1
Signal peptide peptidase-like 4 (539 aa)
           
  0.408
XP_008437291.1
Signal peptide peptidase-like 2 (545 aa)
           
  0.408
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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