STRINGSTRING
XP_008437194.1 protein (Cucumis melo) - STRING interaction network
"XP_008437194.1" - Homeobox protein knotted-1-like 7 in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437194.1Homeobox protein knotted-1-like 7; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 mRNAs, 12 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (300 aa)    
Predicted Functional Partners:
XP_008466956.1
Homeobox protein knotted-1-like 2 (179 aa)
       
 
  0.865
XP_008439714.1
Transcription repressor OFP5; Uncharacterized protein LOC103484429 (468 aa)
       
 
  0.830
XP_008449008.1
Myb-related protein 308 isoform X1 (320 aa)
     
 
  0.823
XP_008453732.1
Transcription repressor OFP7; Beta-adducin (301 aa)
       
 
  0.747
XP_008461973.1
NAC domain-containing protein 7-like (179 aa)
           
  0.742
XP_008460890.1
Transcriptional activator Myb (210 aa)
     
 
  0.727
XP_008437136.1
Protein ODORANT1-like (258 aa)
     
 
  0.722
XP_008446713.1
Cellulose synthase A catalytic subunit 8 [UDP-forming]; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily (1427 aa)
     
   
  0.720
XP_008463251.1
Transcription repressor OFP1; Uncharacterized protein LOC103501454 (331 aa)
       
 
  0.719
XP_008442333.1
Transcription repressor OFP2-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments (380 aa)
       
 
  0.719
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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