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XP_008437198.1 protein (Cucumis melo) - STRING interaction network
"XP_008437198.1" - Serine/threonine-protein kinase RIO1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Textmining
[Homology]
Score
XP_008437198.1Serine/threonine-protein kinase RIO1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family (562 aa)    
Predicted Functional Partners:
XP_008437247.1
RNA-binding protein NOB1 (615 aa)
     
 
  0.994
XP_008449001.1
RNA-binding protein pno1 (224 aa)
   
 
  0.938
XP_008437547.1
RNA-binding protein pno1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (224 aa)
   
 
  0.938
XP_008459984.1
pre-rRNA-processing protein TSR1 homolog (780 aa)
     
   
  0.919
XP_008447125.1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (379 aa)
   
 
  0.913
XP_008461974.1
Bystin isoform X1; Bystin (442 aa)
     
 
  0.910
XP_008447831.1
Nucleolar complex protein 4 homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (604 aa)
     
   
  0.880
XP_008447764.1
Ribosome biogenesis protein BMS1 homolog isoform X1 (1197 aa)
     
   
  0.879
XP_008451529.1
Putative ATP-dependent RNA helicase PB1A10.06c isoform X1 (1325 aa)
     
 
  0.876
XP_008448076.1
RNA-binding protein 28 (967 aa)
     
   
  0.875
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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