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XP_008437199.1 protein (Cucumis melo) - STRING interaction network
"XP_008437199.1" - SPX domain-containing membrane protein At4g22990-like in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437199.1SPX domain-containing membrane protein At4g22990-like (696 aa)    
Predicted Functional Partners:
XP_008445955.1
Protein ZINC INDUCED FACILITATOR-LIKE 1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns (490 aa)
     
   
  0.730
XP_008451564.1
Blue-light photoreceptor PHR2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns (451 aa)
     
   
  0.726
XP_008456184.1
Organic cation/carnitine transporter 7; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns (502 aa)
     
   
  0.586
XP_008447156.1
Folate-biopterin transporter 1, chloroplastic (490 aa)
     
   
  0.579
XP_008438656.1
Folate-biopterin transporter 1, chloroplastic-like isoform X1 (546 aa)
     
   
  0.579
XP_008457190.1
ABC transporter G family member 21; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (673 aa)
           
  0.576
XP_008451875.1
ABC transporter G family member 14 (655 aa)
           
  0.576
XP_008445546.1
Copper transporter 5.1 (142 aa)
           
  0.575
XP_008455613.1
UNC93-like protein 1 (458 aa)
           
  0.572
XP_008455612.1
UNC93-like protein 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns (463 aa)
           
  0.572
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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