STRINGSTRING
XP_008437207.1 protein (Cucumis melo) - STRING interaction network
"XP_008437207.1" - UDP-galactose/UDP-glucose transporter 2 in Cucumis melo
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437207.1UDP-galactose/UDP-glucose transporter 2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (346 aa)    
Predicted Functional Partners:
XP_008449493.1
Probable sugar phosphate/phosphate translocator At1g06470 isoform X1 (408 aa)
           
  0.629
XP_008463163.1
expansin-A13; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (268 aa)
           
  0.578
XP_008460892.1
GDP-mannose transporter GONST1 (337 aa)
           
  0.480
XP_008462752.1
Transmembrane protein 234 homolog (123 aa)
     
 
  0.428
XP_008462891.1
DNA replication complex GINS protein PSF2; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns; Belongs to the GINS2/PSF2 family (211 aa)
           
  0.420
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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