STRINGSTRING
XP_008437209.1 protein (Cucumis melo) - STRING interaction network
"XP_008437209.1" - Dehydration-responsive element-binding protein 1E-like in Cucumis melo
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437209.1Dehydration-responsive element-binding protein 1E-like (229 aa)    
Predicted Functional Partners:
XP_008460555.1
Protein RSI-1-like (95 aa)
           
  0.753
XP_008463453.1
Gibberellin 2-beta-dioxygenase 8-like; Belongs to the iron/ascorbate-dependent oxidoreductase family (343 aa)
           
  0.704
XP_008465606.1
Protein SENSITIVITY TO RED LIGHT REDUCED 1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns (277 aa)
           
  0.629
XP_008460755.1
Thioredoxin reductase NTRC; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (525 aa)
           
  0.612
XP_008444359.1
Cullin-4; Belongs to the cullin family (829 aa)
           
  0.591
XP_008453973.1
Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (337 aa)
           
  0.589
XP_008465998.1
Transcription factor MYB39; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns (310 aa)
           
  0.580
XP_008449385.1
EID1-like F-box protein 3 (304 aa)
           
  0.578
XP_008439070.1
F-box protein SKIP16; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (443 aa)
           
  0.578
XP_008467255.1
Gibberellin 20 oxidase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family (375 aa)
           
  0.573
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
Server load: low (9%) [HD]