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XP_008437221.1 protein (Cucumis melo) - STRING interaction network
"XP_008437221.1" - Heat stress transcription factor B-2b in Cucumis melo
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437221.1Heat stress transcription factor B-2b; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 5 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns (339 aa)    
Predicted Functional Partners:
XP_008458302.1
Multiprotein-bridging factor 1c (212 aa)
     
   
  0.670
XP_008462261.1
dnaJ homolog subfamily B member 6-like (206 aa)
     
 
  0.654
XP_008439162.1
Dehydration-responsive element-binding protein 1A (212 aa)
           
  0.624
XP_008458820.1
NAC domain-containing protein 8 isoform X1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns (398 aa)
           
  0.615
XP_008441966.1
NAC domain-containing protein 100-like (330 aa)
           
  0.615
XP_008438973.1
Transcription factor MYB108 (310 aa)
     
 
  0.604
XP_008439282.1
Heat shock protein 83; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 7 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns (703 aa)
     
 
  0.587
XP_008449928.1
Heat stress transcription factor A-6b-like (216 aa)
 
       
  0.587
XP_008466736.1
NAC domain-containing protein 2 (294 aa)
           
  0.556
XP_008461272.1
NAC domain-containing protein 90-like (238 aa)
           
  0.556
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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