STRINGSTRING
XP_008437247.1 protein (Cucumis melo) - STRING interaction network
"XP_008437247.1" - RNA-binding protein NOB1 in Cucumis melo
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_008437247.1RNA-binding protein NOB1 (615 aa)    
Predicted Functional Partners:
XP_008459984.1
pre-rRNA-processing protein TSR1 homolog (780 aa)
     
 
  0.998
XP_008461974.1
Bystin isoform X1; Bystin (442 aa)
     
 
  0.997
XP_008448921.1
Serine/threonine-protein kinase rio2 (476 aa)
     
 
  0.997
XP_008437198.1
Serine/threonine-protein kinase RIO1; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family (562 aa)
     
 
  0.994
XP_008449001.1
RNA-binding protein pno1 (224 aa)
     
 
  0.992
XP_008437547.1
RNA-binding protein pno1-like; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 1 mRNA, 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns (224 aa)
     
 
  0.992
XP_008464325.1
Uncharacterized protein LOC103502235 (114 aa)
     
 
  0.991
XP_008448616.1
Protein LTV1 homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 11 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns (540 aa)
     
 
  0.991
XP_008442208.1
LOW QUALITY PROTEIN- rRNA biogenesis protein RRP5; The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS- inserted 1 base in 1 codon (1918 aa)
     
 
  0.984
XP_008447831.1
Nucleolar complex protein 4 homolog; Derived by automated computational analysis using gene prediction method- Gnomon. Supporting evidence includes similarity to- 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns (604 aa)
     
 
  0.981
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 3656
Other names: C. melo, Cucumis melo, Cucumis melo L., Oriental melon, muskmelon
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